Pluto Bioinformatics

GSE139000: A novel FACS-based method to isolate enriched populations of neurons, astrocytes, and microglia

Bulk RNA sequencing

We developed a novel FACS-based method to isolate enriched populations of neurons, astrocytes, and microglia. Whole mouse brains were digested, and populations of neurons, astrocytes, and microglia were subsequently enriched by FACS using a combination of positive gating on cell-type specific markers and stringent negative selection against markers of oligodendrocytes and endothelial cells. We confirmed a strong enrichment of corresponding cell-type specific genes in isolated populations and a reduction in gene markers of endothelial cells and oligodendrocytes, demonstrating that highly pure populations of neurons, astrocytes, and microglia were obtained. SOURCE: Thomas Sandmann (sandmann@dnli.com) - Denali Therapeutics

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