Pluto Bioinformatics

GSE136789: Oligomeric human A1-42 inhibits antigen presentation

Bulk RNA sequencing

The goal of this study is to investigate the involvement of inflammation in Alzheimers disease (AD) and to clarify the signaling pathways involved in the presence of beta-amyloidosis, a hallmark of AD pathogenesis, to help identifying potential targets for therapy. To do that, we isolated bone marrow-derived progenitor cells from femurs, tibiae and hip bones of non-transgenic C57BL/6 mice according to established protocols , and we maturated them with LPS. To obtain an unbiased view of gene regulation in mouse bone marrow-derived dendritic cells (BM-DCs) exposed to pre-aggregated beta-amyloid peptide (A) oligomers, we analyzed the transcriptome of untreated immature control BM-DCs (Ctrl), LPS-treated BM-DCs (LPS), A1-42 oligomer-treated BM-DCs (A) and BM-DCs treated with A1-42 oligomers and LPS (A+LPS) via explorative RNA-sequencing. SOURCE: Anna Mallone (anna.mallone@uzh.ch) - University of Zurich

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