Pluto Bioinformatics

GSE93357: RNA-seq on Tbx5ua Knockdown mice

Bulk RNA sequencing

By comprehensive screening of long non-coding RNAs (lncRNAs) over mouse heart development, we have identified Tbx5 upstream antisense RNA (Tbx5ua). In order to understand its function, we produced Tbx5ua knock down ES cells by inserting triple bovine polyadenylation signal to the second exon of Tbx5ua. From the ES cells we made chimeric mouse embryos via tetraploid complementation assay. We conducted RNA-seq analysis on the WT and KD heart ventricles at E9.5 to further elucidate the lncRNA's molecular functions. SOURCE: Yutaro Hori (complexity.rite@gmail.com) - Laboratory of Cell Growth and Differentiation The University of Tokyo