Pluto Bioinformatics

GSE69733: Knockdown of SR protein family in P19 cells and RNA-seq of cytoplasmic and whole cell polyA+ RNA

Bulk RNA sequencing

Our data suggest that all SR proteins contribute to mRNA export via NXF1. To identify endogenous export targets we depleted all seven SR proteins individually from P19 WT cells prepared cytoplasmic fractions. We sequenced the cytoplasmic fraction and as a control whole celll RNA from the identical sample. SOURCE: Michaela Müller-McNicoll (mueller-mcnicoll@bio.uni-frankfurt.de) - RNA Regulation Group Goethe University Frankfurt