Pluto Bioinformatics

GSE96961: Environmental enrichment prevents transcriptional disturbances induced by alpha-Synuclein overexpression

Bulk RNA sequencing

Using a mouse model overexpressing human SNCA and profiling the hippocampal transcriptome, we assessed gene-environment interactions to reveal perturbations in gene expression and their modulation through long-term enriched environment (EE) exposure. We observed that EE prevented perturbations of genes attributed to neuronal and glial cell types and linked to glutamate signaling, calcium homeostasis, inflammation, and related processes of SNCA biology. Cluster and promoter analyses suggested driver genes that specifically responded to the EE, and pointed to a pivotal role of Egr1 to have hierarchically activated other drivers. We suggest a model in which EE-induced driver genes prevent and counter-balance perturbations of SNCA overexpression, restoring a largely normalized gene expression profile and system state. SOURCE: Julia,Maria,Schulze-Hentrich (juliamschulze@gmail.com) - University of Tuebingen

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